Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890218.1_cds_XP_016444883.1_39898
CDS Infomation

[gene=LOC107770128] [db_xref=GeneID:107770128] [protein=probable pectinesterase/pectinesterase inhibitor 17] [protein_id=XP_016444883.1] [location=join(110710..111583,112117..112808)] [gbkey=CDS]
Sequence

ATGGAGACAAAGCTTGGTTTCTTCGTACTATTCATTTCCTTTTCTGCATTCCTTTTTCCT
GCTTTTTCCATTACCCTTTTTGACAATGACATCAATAATTGGTGCAACAAAGCCCCTTAT
CCCAATCAATGCAAGTATTTCATGAACCATGGTCCGTATCATTTTGCACCCAAGTACAAG
ACGGATTTCAAGAAAATGGCAATGCAAATAGCCATGGAAAGAGCACTCCAAGCTGAGACT
TACACCAAACAACTAGGTACAAAGTGTAGGAATGAACGCGAGAAGGCAGCTTGGTCCGAT
TGCGTTAACCTCTACGAGAGCACAATTCTCCAACTCAATAAAACACTCGACCCAAATACC
AAGTGTACCGATTTTGATACACAAACATGGTTAAGTACAGCCTTAACAAATCTTGAAACT
TGTCGAACCGGGTTCGTTGAGCTAGGCGTTAATTCAGACTACATTTTACCTAGTATCATG
TCAAACAATGTGTCTGAATTAATTTGTAACACTTTGGCACTCAACAATAATGGCTCCACT
TTGAAGCAAACTTATAAATATGGTTTCCCAACTTGGTTTTCTCCAGGTGACAGAAAATTG
TTGCAATCATCTACCGTAAGGCCAAATATAGTGGTGGTTCAAGATGGTACGGGGAATTTC
CGGACAATTAAAGCAGCGTTAGATGCTGCTGCTAAAAGAAGTGGAAATGGAAGGTTTATT
ATACATGTGAAGCGTGGAGTTTACAGAGAGAATTTGGAGATTGGAAACAAAATGAAGAAT
ATTATGTTGGTTGGTGATGGTTTGAGGTACACCATTATCACGGGTAGCCGCAGTGTAGTT
GGAGGTTCTACCACGTTTAAATCTGCTACTGTTGCTGTTACTGGGGAAGGATTTATTGCT
CGAGGCATCACATTCCGCAACACAGCTGGTCCACAAAATCATCAAGCAGTTGCACTGCGT
TCTGGATCTGACCAATCAGTTTTCTATCGTTGTGGATTTGAAGGATATCAAGACACACTT
TACGTCCATTCACAAAGACAATTCTATAAAGAATGTTATATCTACGGGACAGTTGACTTC
ATTTTTGGTAACGCTGCAGTAGTTTTGCAAAACTGCATGATATTTGCTAGGCAACCTATG
GATAAACAAAAGATTACTATAACAGCACAAGGCCGCACTGATCCTAACCAAAATACTGGA
ATTTCAATACATAATTCGCGAGTTATGGCAGCTTCTGACCTTAGGCCTGTGTTAAATACA
TTCAAGACATATTTGGGACGACCATGGAAACAATATTCACGTACTGTTTTTATGAAAACG
TACCTTGATTCGTTGGTGGATCCTGCTGGTTGGCTAGAATGGGATGGTAATTTTGCTTTA
AATACTTTGTACTATGGAGAATATAGGAACAGTGGAGCTGGAGCATCGACTAGTAGGAGA
GTCAGGTGGCGCGGGTATCGAGTGATCACAAATTCAAATGAAGCAGCAAAGTTCAGTGTG
GAAAATTTTATTGCTGGTCGATCATGGTTGCCTGCAACCAACGTGCCATTTCGTGCAGGT
CTCTAA

Peptide Sequence

PEP ID

XP_016444883.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 17 [Nicotiana tabacum]
Sequence

METKLGFFVLFISFSAFLFPAFSITLFDNDINNWCNKAPYPNQCKYFMNHGPYHFAPKYK
TDFKKMAMQIAMERALQAETYTKQLGTKCRNEREKAAWSDCVNLYESTILQLNKTLDPNT
KCTDFDTQTWLSTALTNLETCRTGFVELGVNSDYILPSIMSNNVSELICNTLALNNNGST
LKQTYKYGFPTWFSPGDRKLLQSSTVRPNIVVVQDGTGNFRTIKAALDAAAKRSGNGRFI
IHVKRGVYRENLEIGNKMKNIMLVGDGLRYTIITGSRSVVGGSTTFKSATVAVTGEGFIA
RGITFRNTAGPQNHQAVALRSGSDQSVFYRCGFEGYQDTLYVHSQRQFYKECYIYGTVDF
IFGNAAVVLQNCMIFARQPMDKQKITITAQGRTDPNQNTGISIHNSRVMAASDLRPVLNT
FKTYLGRPWKQYSRTVFMKTYLDSLVDPAGWLEWDGNFALNTLYYGEYRNSGAGASTSRR
VRWRGYRVITNSNEAAKFSVENFIAGRSWLPATNVPFRAGL

Transcript Sequence

Gene sequence data has not been registered.